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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21283674_21286000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21283674 - 21286000

Intron Length:

2327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGACCTTTAATG

Flanking Amino Acid:

QVIKVLNPQKQQLRMRIKLT

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.88

0.6

85.4

21.8

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

64.5

0.32

1.3

62.55

39.4

Associated Gene:

Gene:

AP1G1

Ensembl Gene ID:

ENSAPLG00000014217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032019

21244921 - 21287246

42326

ENSAPLT00000018459

21244921 - 21287246

42326

ENSAPLT00000014910

21253681 - 21287246

33566