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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21339004_21339380_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21339004 - 21339380

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTATCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAA

U12 Branch Point Sequence:

ACAACCCTAACA

Flanking Amino Acid:

ILADEIYGDMVFADCKYEPI

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

49.3

-0

1.3

57.4

35.7

Major PPT

74.4

0.55

0.8

68.1

30.5

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

56.4

0.2

1.7

64.62

41.1

Associated Gene:

Gene:

TAT

Ensembl Gene ID:

ENSAPLG00000013354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020695

21336056 - 21343493

7438

ENSAPLT00000013910

21336056 - 21343493

7438