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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21340493_21340564_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21340493 - 21340564

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

AATATCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

AAATCAATATCT

Flanking Amino Acid:

FYHNTLSILKPILMAGILVM

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

69.4

0.44

0.9

59.9

41.8

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

46.7

-0.1

2.1

67.46

42.2

Associated Gene:

Gene:

TAT

Ensembl Gene ID:

ENSAPLG00000013354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020695

21336056 - 21343493

7438