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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21340926_21342433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21340926 - 21342433

Intron Length:

1508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

CATGTTCCATCC

Flanking Amino Acid:

VRPAGAMYLMVEIEMEHFPE

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

78.5

0.64

0.8

72.5

32.2

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

37.5

-0.9

1.9

43.37

38.3

Associated Gene:

Gene:

TAT

Ensembl Gene ID:

ENSAPLG00000013354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013910

21336056 - 21343493

7438

ENSAPLT00000020695

21336056 - 21343493

7438