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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21342533_21343310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21342533 - 21343310

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCATG

5'SS Class:

major

3'SS Sequence:

TTTATCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCCTTTATC

Flanking Amino Acid:

EQSVFCLPATCFEYPNFFRV

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

66.8

44.5

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.79

0.8

82.3

33.9

Minor 5ss

45.2

-0.5

2.9

63.4

41.8

Minor BPS

72.3

0.68

1.5

79.49

35.7

Associated Gene:

Gene:

TAT

Ensembl Gene ID:

ENSAPLG00000013354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013910

21336056 - 21343493

7438

ENSAPLT00000020695

21336056 - 21343493

7438