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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21368607_21369489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21368607 - 21369489

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTACTAGAATT

Flanking Amino Acid:

MRIAPELYHKMVVVGGLDRV

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

79.8

0.67

0.8

80.2

31.9

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

55.3

0.25

1.7

78.73

37.3

Associated Gene:

Gene:

KARS1

Ensembl Gene ID:

ENSAPLG00000012705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043172

21363244 - 21374061

10818

ENSAPLT00000026162

21363244 - 21374017

10774

ENSAPLT00000020362

21363244 - 21374040

10797

ENSAPLT00000013266

21364231 - 21374040

9810