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Intron Name: Anas_platyrhynchos_platyrhynchos_12_21373696_21373930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21373696 - 21373930

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCGCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GCGCGCTGAGGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

81.8

0.72

0.8

76.3

32.2

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

34.1

-1.3

30.1

Associated Gene:

Gene:

ADAT1

Ensembl Gene ID:

ENSAPLG00000012379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012894

21373552 - 21392314

18763

Gene:

KARS1

Ensembl Gene ID:

ENSAPLG00000012705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043172

21363244 - 21374061

10818

ENSAPLT00000026162

21363244 - 21374017

10774