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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2405767_2406288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2405767 - 2406288

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTACATTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TTACATTTAACA

Flanking Amino Acid:

YNTEIVSQEQVDAIMNLVST

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

72.4

0.56

79.3

29.5

Major PPT

74.2

0.54

69.7

39.9

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

66.8

0.52

1.5

75.03

35.7

Associated Gene:

Gene:

VPS35

Ensembl Gene ID:

ENSAPLG00000009261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046436

2399037 - 2416224

17188

ENSAPLT00000020989

2399037 - 2418470

19434

ENSAPLT00000009674

2399447 - 2416224

16778