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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2407177_2407271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2407177 - 2407271

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGG

5'SS Class:

major

3'SS Sequence:

TCTTAAATCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCAACT

Flanking Amino Acid:

FSQQVATVIQSRQDMPSEDV

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

62.3

44.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.2

0.55

0.9

70.8

38.5

Minor 5ss

49.3

-0

2.5

64.5

46.9

Minor BPS

61.4

0.43

87.17

37.6

Associated Gene:

Gene:

VPS35

Ensembl Gene ID:

ENSAPLG00000009261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046436

2399037 - 2416224

17188

ENSAPLT00000020989

2399037 - 2418470

19434

ENSAPLT00000009674

2399447 - 2416224

16778