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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2411504_2411799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2411504 - 2411799

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGACAG

5'SS Class:

major

3'SS Sequence:

TCCTCAATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTTCCTCAATT

Flanking Amino Acid:

NILPDEGEQTDEETTGDISD

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

56.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

76.6

0.6

0.9

70.1

Minor 5ss

32.6

-2

3.1

41.5

Minor BPS

76.6

0.91

1.4

89.4

34.9

Associated Gene:

Gene:

VPS35

Ensembl Gene ID:

ENSAPLG00000009261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046436

2399037 - 2416224

17188

ENSAPLT00000020989

2399037 - 2418470

19434

ENSAPLT00000009674

2399447 - 2416224

16778