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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2411983_2413304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2411983 - 2413304

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GTGCCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

TCTTACTTAACT

Flanking Amino Acid:

VQYAGNIIPRLYLLITVGVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

71.9

0.49

41.2

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

81.8

1.08

1.4

93.1

35.2

Associated Gene:

Gene:

VPS35

Ensembl Gene ID:

ENSAPLG00000009261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046436

2399037 - 2416224

17188

ENSAPLT00000020989

2399037 - 2418470

19434

ENSAPLT00000009674

2399447 - 2416224

16778