Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_2437368_2437833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2437368 - 2437833

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ATACTCTTATCT

Flanking Amino Acid:

QHYILHLDLKPENILCVNRT

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

84.9

0.79

0.7

81.1

30.5

Minor 5ss

32.9

-2

2.7

43.5

Minor BPS

0.45

1.6

76.66

39.5

Associated Gene:

Gene:

MYLK3

Ensembl Gene ID:

ENSAPLG00000009568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009967

2432191 - 2458338

26148