Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_2439277_2439601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2439277 - 2439601

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCATG

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTTGTTCATT

Flanking Amino Acid:

IIKVKGAKEKEEVKNEINIM

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

72.7

44.5

Major BPS

84.8

0.86

85.7

34.9

Major PPT

95.9

1.03

0.5

95.6

15.1

Minor 5ss

48.5

-0.1

2.6

45.2

Minor BPS

53.5

0.19

2.4

82.74

39.5

Associated Gene:

Gene:

MYLK3

Ensembl Gene ID:

ENSAPLG00000009568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009967

2432191 - 2458338

26148