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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2439696_2441068_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2439696 - 2441068

Intron Length:
1373

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGTCTC

5'SS Class:
strong_major

3'SS Sequence:
TTCGTATCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCGTAT

U12 Branch Point Sequence:
TGTATTCCAACT

Flanking Amino Acid:
YSVCRHEVLGGGRFGQVHKC

Intron Amino Acid Position:
482

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.1
0.85
0.9
76.2
39.9

Major BPS
66.5
0.41
1.4
65.7
43.2

Major PPT
71.5
0.48
1
66.5
38.6

Minor 5ss
38.3
-1.3
3
45.5
42.6

Minor BPS
48
-0
1.9
70.29
40.4

Associated Gene:

Gene:
MYLK3

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2432191 - 2458338
26148