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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2447069_2458092_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2447069 - 2458092

Intron Length:
11024

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
CCGCTGTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTGAC

U12 Branch Point Sequence:
TTGACTATAACT

Flanking Amino Acid:
CVSDYVKRFTAKDKPEESGA

Intron Amino Acid Position:
83

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.9
85.6
31.2

Major BPS
73.9
0.59
1
65.3
41.6

Major PPT
71.3
0.48
0.9
68.5
37.3

Minor 5ss
39.1
-1.2
3.4
59
45.5

Minor BPS
64.4
0.53
1.7
81.68
39.7

Associated Gene:

Gene:
MYLK3

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2432191 - 2458338
26148