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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2479025_2482816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2479025 - 2482816

Intron Length:

3792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATGATCTGAAAT

Flanking Amino Acid:

TKSCPECDQQVPVACKSCPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

53.1

0.17

1.6

69.32

Associated Gene:

Gene:

C16orf87

Ensembl Gene ID:

ENSAPLG00000009799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030305

2459221 - 2482882

23662

ENSAPLT00000010197

2470526 - 2482882

12357