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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2528166_2528681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2528166 - 2528681

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTGGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

CAGTACTGAATG

Flanking Amino Acid:

NNWISPEKLSELEDLLPARP

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

74.2

0.54

1.1

72.9

42.2

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

48.5

-0.2

1.7

50.4

43.6

Associated Gene:

Gene:

DNAJA2

Ensembl Gene ID:

ENSAPLG00000010151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010596

2527977 - 2538001

10025