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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2532610_2532910_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2532610 - 2532910

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAAGCATT

5'SS Class:

major

3'SS Sequence:

ACAAAGCAACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

GCTTCATTATAT

Flanking Amino Acid:

MIRTPLPRGLRSITTYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.3

81.8

38.5

Major BPS

70.4

0.51

67.1

39.4

Major PPT

47.9

-0.1

1.1

33.7

39.8

Minor 5ss

35.5

-1.6

4.1

58.5

45.8

Minor BPS

50.8

0.1

71.45

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031048

2532587 - 2534445

1859