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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2532984_2534361_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2532984 - 2534361

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCTTTCCA

5'SS Class:

weak_major

3'SS Sequence:

GCTTGAAAGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCAAT

U12 Branch Point Sequence:

AAAGCTTGAAAG

Flanking Amino Acid:

RTFLLSCSLVYELQHQDTYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.3

49.7

40.7

Major BPS

64.1

0.35

1.2

33.2

Major PPT

43.3

-0.3

1.7

44.6

45.1

Minor 5ss

36.2

-1.6

2.6

40.2

40.3

Minor BPS

46.1

-0.4

1.6

46.26

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031048

2532587 - 2534445

1859