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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2534613_2535542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2534613 - 2535542

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

ACTGATTTGACT

Flanking Amino Acid:

PDKNPNAGDKFKEISFAYEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

74.1

0.54

0.8

65.6

36.1

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

54.2

0.21

1.6

69.73

41.6

Associated Gene:

Gene:

DNAJA2

Ensembl Gene ID:

ENSAPLG00000010151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010596

2527977 - 2538001

10025