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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2612413_2613225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2612413 - 2613225

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGACAT

U12 Branch Point Sequence:

TTGCTAGGAAAT

Flanking Amino Acid:

VGIPRPLGEKSIRKQEWTAI

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

35.8

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

90.8

0.92

0.7

88.9

28.1

Minor 5ss

35.9

-1.6

2.6

42.1

44.4

Minor BPS

39.9

-0.6

2.2

60.57

42.5

Associated Gene:

Gene:

ITFG1

Ensembl Gene ID:

ENSAPLG00000010587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038371

2606810 - 2675570

68761

ENSAPLT00000025969

2607146 - 2675570

68425

ENSAPLT00000023391

2608926 - 2675570

66645

ENSAPLT00000048217

2607146 - 2675570

68425

ENSAPLT00000011110

2607146 - 2678119

70974

ENSAPLT00000044502

2609945 - 2675570

65626