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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2626537_2634326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2626537 - 2634326

Intron Length:

7790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

ATATGTTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATATGTTTTACA

Flanking Amino Acid:

ALAILRNTSGSNQQAFLLEN

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

80.8

28.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.6

0.67

0.9

72.9

41.5

Minor 5ss

-1.9

3.4

45.9

49.3

Minor BPS

50.4

0.01

66.11

40.6

Associated Gene:

Gene:

ITFG1

Ensembl Gene ID:

ENSAPLG00000010587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025969

2607146 - 2675570

68425

ENSAPLT00000023391

2608926 - 2675570

66645

ENSAPLT00000048217

2607146 - 2675570

68425

ENSAPLT00000011110

2607146 - 2678119

70974

ENSAPLT00000044502

2609945 - 2675570

65626

ENSAPLT00000038371

2606810 - 2675570

68761