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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2677491_2679782_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

2677491 - 2679782

Intron Length:

2292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGACCT

5'SS Class:

major

3'SS Sequence:

AAAATTGCTGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTACTAAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.3

61.7

42.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

59.3

0.21

51.9

42.7

Minor 5ss

36.1

-1.6

49.6

46.2

Minor BPS

61.4

0.22

1.9

70.93

41.9

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011611

2677355 - 2752789

75435