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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2687733_2692601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2687733 - 2692601

Intron Length:

4869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATCACCCTAACT

Flanking Amino Acid:

ACSWALALAYRCLKSRTPAQ

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.7

32.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

84.1

0.77

0.7

79.5

26.1

Minor 5ss

29.5

-2.3

2.8

35.9

41.1

Minor BPS

64.3

0.53

1.8

80.25

41.1

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021534

2679511 - 2752789

73279

ENSAPLT00000011611

2677355 - 2752789

75435

ENSAPLT00000045950

2679511 - 2752789

73279

ENSAPLT00000032239

2682921 - 2752789

69869

ENSAPLT00000026761

2679511 - 2754688

75178