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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2708905_2715328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2708905 - 2715328

Intron Length:

6424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTAAACTTATGA

Flanking Amino Acid:

INGFNLFGNQNTDAALLPCL

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

89.3

0.88

0.6

84.8

22.8

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

47.2

-0.2

2.1

62.18

43.4

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042937

2679511 - 2753671

74161