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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2713877_2715328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2713877 - 2715328

Intron Length:

1452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTAAACTTATGA

Flanking Amino Acid:

SLLPRESRSHNTDAALLPCL

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

89.3

0.88

0.6

84.8

22.8

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

47.2

-0.2

2.1

62.18

43.4

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026761

2679511 - 2754688

75178

ENSAPLT00000032847

2679511 - 2753671

74161

ENSAPLT00000025977

2679511 - 2753671

74161

ENSAPLT00000032239

2682921 - 2752789

69869

ENSAPLT00000021534

2679511 - 2752789

73279

ENSAPLT00000029733

2677355 - 2753671

76317

ENSAPLT00000011611

2677355 - 2752789

75435

ENSAPLT00000029386

2679511 - 2750499

70989

ENSAPLT00000045950

2679511 - 2752789

73279