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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2728408_2731634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2728408 - 2731634

Intron Length:

3227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTACTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTCTTCAGTT

Flanking Amino Acid:

QIWAQKELVKAYFHLGVNDK

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.8

33.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

81.3

0.7

0.8

76.2

32.1

Minor 5ss

34.3

-1.8

3.2

43.2

38.3

Minor BPS

63.2

0.49

1.7

84.06

37.3

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021534

2679511 - 2752789

73279

ENSAPLT00000029733

2677355 - 2753671

76317

ENSAPLT00000045950

2679511 - 2752789

73279

ENSAPLT00000011611

2677355 - 2752789

75435

ENSAPLT00000029386

2679511 - 2750499

70989

ENSAPLT00000042937

2679511 - 2753671

74161

ENSAPLT00000026761

2679511 - 2754688

75178

ENSAPLT00000032847

2679511 - 2753671

74161

ENSAPLT00000025977

2679511 - 2753671

74161

ENSAPLT00000032239

2682921 - 2752789

69869