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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2732308_2733121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2732308 - 2733121

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACCT

Flanking Amino Acid:

DVMMLIDDIKNALQFIKQYW

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

79.2

0.66

0.8

74.1

35.7

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

79.4

1.5

95.32

31.5

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029386

2679511 - 2750499

70989

ENSAPLT00000042937

2679511 - 2753671

74161

ENSAPLT00000026761

2679511 - 2754688

75178

ENSAPLT00000032847

2679511 - 2753671

74161

ENSAPLT00000025977

2679511 - 2753671

74161

ENSAPLT00000032239

2682921 - 2752789

69869

ENSAPLT00000011611

2677355 - 2752789

75435

ENSAPLT00000029733

2677355 - 2753671

76317

ENSAPLT00000045950

2679511 - 2752789

73279