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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2732308_2736127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2732308 - 2736127

Intron Length:

3820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCTTTTTAAAT

Flanking Amino Acid:

DVMMLIDDIKTLISGAVVEQ

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.5

0.93

0.7

89.9

24.7

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

68.2

0.65

1.3

78.79

37.6

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021534

2679511 - 2752789

73279