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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2733376_2736127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2733376 - 2736127

Intron Length:

2752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCTTTTTAAAT

Flanking Amino Acid:

GVKVHVDRVQTLISGAVVEQ

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.5

0.93

0.7

89.9

24.7

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

68.2

0.65

1.3

78.79

37.6

Associated Gene:

Gene:

PHKB

Ensembl Gene ID:

ENSAPLG00000011023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029386

2679511 - 2750499

70989

ENSAPLT00000042937

2679511 - 2753671

74161

ENSAPLT00000026761

2679511 - 2754688

75178

ENSAPLT00000032847

2679511 - 2753671

74161

ENSAPLT00000025977

2679511 - 2753671

74161

ENSAPLT00000032239

2682921 - 2752789

69869

ENSAPLT00000011611

2677355 - 2752789

75435

ENSAPLT00000029733

2677355 - 2753671

76317

ENSAPLT00000045950

2679511 - 2752789

73279