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Intron Name: Anas_platyrhynchos_platyrhynchos_12_2890692_2892336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2890692 - 2892336

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACTA

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

GTTTGGTAAACA

Flanking Amino Acid:

LDRMEVIQVPGYTQEEKIEI

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

71.7

40.1

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

81.3

0.7

0.9

83.5

25.2

Minor 5ss

41.1

-1

3.2

56.8

47.3

Minor BPS

46.3

-0.2

2.6

67.6

44.9

Associated Gene:

Gene:

LONP2

Ensembl Gene ID:

ENSAPLG00000012127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022355

2869766 - 2908734

38969

ENSAPLT00000012665

2869766 - 2911900

42135

ENSAPLT00000038661

2870426 - 2908734

38309

ENSAPLT00000033298

2869766 - 2909343

39578

ENSAPLT00000029640

2789975 - 2908734

118760