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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3038271_3061426_F

Intron Information:

Intron Rank:

142912

Intron Class:

major

Intron Phase:

Intron Coordinates:

3038271 - 3061426

Intron Length:

23156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

ACACTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GTCACCTGATAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

72.4

32.2

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

76.1

0.59

0.9

69.5

35.9

Minor 5ss

34.6

-1.8

3.3

45.9

43.7

Minor BPS

45.8

-0.3

1.8

54.46

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017526

3038032 - 3120060

82029