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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3061540_3075718_F

Intron Information:

Intron Rank:

142921

Intron Class:

major

Intron Phase:

Intron Coordinates:

3061540 - 3075718

Intron Length:

14179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTCTCTAGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

42.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

72.9

0.51

0.9

71.2

38.7

Minor 5ss

33.7

-1.9

2.8

31.9

42.5

Minor BPS

64.3

0.53

1.7

84.21

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046183

3048555 - 3076221

27667