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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3169470_3171981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3169470 - 3171981

Intron Length:

2512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TAAACCTTCATT

Flanking Amino Acid:

CNHLLWNYKLNLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

77.8

0.69

78.2

31.8

Major PPT

81.5

0.71

0.7

74.2

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

59.3

0.37

1.8

75.01

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016956

3169461 - 3199295

29835