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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3183652_3185459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3183652 - 3185459

Intron Length:

1808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTAAAT

U12 Branch Point Sequence:

CAGGACTAAATC

Flanking Amino Acid:

LMCLESAVHRGRQVSSECQG

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

0.27

1.1

67.3

35.2

Major PPT

74.8

0.56

0.9

72.5

37.7

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

44.3

-0.4

1.9

47.68

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016956

3169461 - 3199295

29835