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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3185675_3189194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3185675 - 3189194

Intron Length:

3520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAA

U12 Branch Point Sequence:

CTGTCCACAATT

Flanking Amino Acid:

GNVGLNCQQALQTLIQETDP

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

59.1

45.8

Major BPS

55.9

0.15

63.2

34.1

Major PPT

91.4

0.93

0.6

84.6

30.4

Minor 5ss

29.1

-2.4

3.5

38.2

46.7

Minor BPS

0.2

1.9

73.04

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016956

3169461 - 3199295

29835