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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3189317_3189962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3189317 - 3189962

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CTTCTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

CCTTGCCTAACT

Flanking Amino Acid:

ACKHIRSGDPMILSCLMEHL

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.5

38.7

Major BPS

0.57

1.2

41.2

Major PPT

78.5

0.64

0.9

72.2

37.8

Minor 5ss

34.1

-1.8

3.5

47.1

42.3

Minor BPS

55.3

0.24

2.2

76.24

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016956

3169461 - 3199295

29835