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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3196033_3196375_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3196033 - 3196375

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGCTCA

5'SS Class:

weak_major

3'SS Sequence:

ATTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTACTGTGAAA

Flanking Amino Acid:

MDIQIEALLMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.2

55.1

38.4

Major BPS

58.9

0.22

49.8

35.1

Major PPT

0.9

0.7

85.5

28.4

Minor 5ss

46.7

-0.3

2.4

54.8

43.6

Minor BPS

48.3

-0.1

2.1

67.94

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015