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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3197229_3197614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3197229 - 3197614

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACATTTCTAATT

Flanking Amino Acid:

CAIGVTHFQLVQMKDFRFSY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

52.7

0.16

1.6

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015