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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3197704_3198588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3197704 - 3198588

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TTAAAAAAAACT

Flanking Amino Acid:

VLKLCPNIKKKVDVVICLST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

75.5

40.6

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

91.9

0.94

0.6

88.3

21.4

Minor 5ss

37.8

-1.4

3.1

50.7

40.2

Minor BPS

41.8

-0.5

2.2

65.42

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015