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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3199818_3200369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3199818 - 3200369

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGAT

5'SS Class:

strong_major

3'SS Sequence:

CGCTGTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

ATGCCTGTAACG

Flanking Amino Acid:

CQNVPYGNAQIIECLKEIKK

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

74.9

34.9

Major BPS

62.2

0.3

1.2

38.7

Major PPT

67.3

0.39

60.8

40.2

Minor 5ss

-2.2

3.6

46.5

48.8

Minor BPS

49.6

-0.1

2.1

58.85

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015