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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3203135_3203732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3203135 - 3203732

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTTTTTGAGA

Flanking Amino Acid:

LKIKTEMCKKEVLNMLKESK

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

33.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.4

0.62

0.7

69.1

31.4

Minor 5ss

27.9

-2.5

3.5

37.1

47.5

Minor BPS

65.4

0.48

1.6

77.15

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015