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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3216701_3217674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3216701 - 3217674

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGAGAT

5'SS Class:

major

3'SS Sequence:

TTGTCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTGCACTGACT

Flanking Amino Acid:

LALATAASRNGVQIHERTSV

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

37.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

0.76

0.8

81.6

30.4

Minor 5ss

31.2

-2.2

3.6

43.5

46.1

Minor BPS

53.7

0.2

2.1

81.53

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276