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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3217797_3218842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3217797 - 3218842

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGTTTTGTAATT

Flanking Amino Acid:

CQYFVNCAGQWAYELGHSGD

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.1

0.72

0.9

78.9

38.5

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276