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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3220415_3223233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3220415 - 3223233

Intron Length:

2819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTCCG

5'SS Class:

major

3'SS Sequence:

GTCTCCATCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGAAA

U12 Branch Point Sequence:

AAAGCCTTGACT

Flanking Amino Acid:

QNLQEDWDHFEPLLSSLLRR

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

60.7

43.7

Major BPS

56.6

0.17

1.3

67.7

36.5

Major PPT

71.5

0.48

0.9

62.3

38.5

Minor 5ss

40.8

-1

2.7

47.7

42.1

Minor BPS

67.4

0.63

1.4

75.26

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276