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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3223427_3224929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3223427 - 3224929

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTTCTTTACT

Flanking Amino Acid:

AGISYGGGAGKYLAEWMVNG

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

0.6

65.6

41.1

Major PPT

71.9

0.49

0.9

70.7

34.8

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

79.9

1.02

1.5

95.83

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276