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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3229054_3229406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3229054 - 3229406

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTCATCCTAATG

Flanking Amino Acid:

TMEDVTWKYTALNLIGPRAV

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.4

0.73

0.7

81.3

23.8

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

47.9

-0.2

1.8

51.82

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276