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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3229502_3230117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3229502 - 3230117

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGATTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

ATGTTTTCACCC

Flanking Amino Acid:

PEHFPSLFCKEMSVGYANGI

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

79.5

0.66

0.9

73.2

36.9

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

48.5

-0.1

1.8

59.95

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028555

3195484 - 3232498

37015

ENSAPLT00000002913

3212654 - 3232929

20276