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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3400845_3403870_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3400845 - 3403870

Intron Length:
3026

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGGCAA

5'SS Class:
strong_major

3'SS Sequence:
TCTCTCCTGTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAT

U12 Branch Point Sequence:
TGTTCTGCATCT

Flanking Amino Acid:
QHNSGHGDEEALKEDFLNDL

Intron Amino Acid Position:
367

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.5
0.81
0.9
70.9
36.4

Major BPS
62.4
0.31
1.4
73.6
41.8

Major PPT
77.3
0.61
0.9
77
31.7

Minor 5ss
24.6
-2.9
3
28.8
43.6

Minor BPS
46.3
-0.2
2.4
72.71
44.3

Associated Gene:

Gene:
WDR59

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3382035 - 3424175
42141

3382035 - 3424175
42141