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Intron Name: Anas_platyrhynchos_platyrhynchos_12_3408095_3409097_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3408095 - 3409097

Intron Length:
1003

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGTGAG

5'SS Class:
strong_major

3'SS Sequence:
TTTCTCTCTCAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTAAC

U12 Branch Point Sequence:
TTCTCTCTCAAG

Flanking Amino Acid:
QVPVWKARYTPFSNGLVTVM

Intron Amino Acid Position:
244

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
0.9
68.7
38.1

Major BPS
56.7
0.17
1.3
61.4
43.2

Major PPT
77.3
0.61
1
76
32.9

Minor 5ss
27.1
-2.6
3
31.9
42.5

Minor BPS
45.3
-0.5
2.2
56.82
44.8

Associated Gene:

Gene:
WDR59

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3382035 - 3424175
42141

3382035 - 3424175
42141